ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

Chromosome Search Result

Search by: Chr = chr16
SNP (count: 480)

Literature-origin SNPs (count: 72)

LD-proxies (count: 408)


CNV (count: 35)
ID Band Size Type Inheritance Related Genes
CNV_Elia[2010]_173 16p13.2 88255 Deletion (hemizygous) Paternal RBFOX1
CNV_Elia[2010]_174 16q22.1 86375 Deletion (hemizygous) Maternal CYB5B
CNV_Elia[2010]_175 16q12.2 263064 Duplication Paternal FTO IRX3
CNV_Elia[2010]_176 16q23.2 42768 Deletion (hemizygous) Paternal
CNV_Elia[2010]_177 16q23.2 13291 Deletion (hemizygous) Maternal
CNV_Elia[2010]_178 16p13.12 12763 Deletion (hemizygous) Maternal
CNV_Elia[2010]_179 16q23.3-16q24.1 88215 Deletion (hemizygous) Maternal MBTPS1 SLC38A8
CNV_Elia[2010]_180 16p13.2 29054 Deletion (hemizygous) Maternal
CNV_Elia[2010]_181 16p13.2 47159 Deletion (hemizygous) Maternal RBFOX1
CNV_Elia[2010]_182 16p13.2 83626 Deletion (hemizygous) Paternal
CNV_Elia[2010]_183 16q23.2 9100 Deletion (hemizygous) Maternal
CNV_Elia[2010]_184 16q24.1 41663 Deletion (hemizygous) Paternal ATP2C2
CNV_Elia[2010]_185 16q23.1 36670 Deletion (hemizygous) Maternal ADAMTS18
CNV_Elia[2010]_186 16p13.3-16p13.2 711234 Duplication Paternal RBFOX1
CNV_Elia[2010]_187 16q24.1 19183 Deletion (hemizygous) Paternal
CNV_Elia[2010]_188 16p13.13 21021 Deletion (hemizygous) Paternal
CNV_Elia[2010]_189 16q24.1 76283 Deletion (hemizygous) Maternal WFDC1
CNV_Williams[2010]_4 16p13.11-16p12.3 2775666 Gain Maternal ABCC1 ABCC6 C16orf45 FOPNL KIAA0430 MIR3179-2 MIR3180-2 MIR484 MPV17L MYH11 NDE1 NOMO3 PKD1P1 PKD1P2 RPL15P20 RPL17P40 RPL7P47 XYLT1
CNV_Williams[2010]_16 16p11.2 803963 Loss ALDOA ASPHD1 BOLA2 BOLA2B C16orf53 C16orf54 C16orf92 CD2BP2 CDIPT CORO1A DCTPP1 DOC2A FAM57B GDPD3 HIRIP3 INO80E KCTD13 MAPK3 MAZ MVP MYLPF PPP4C PRRT2 QPRT SEPHS2 SEZ6L2 SLX1A SLX1B SPN SULT1A3 SULT1A4 TAOK2 TBC1D10B TBX6 TMEM219 YPEL3 ZNF48 ZNF771
CNV_Williams[2010]_20 16p13.11 788434 Gain ABCC1 ABCC6 C16orf45 FOPNL KIAA0430 MIR484 MPV17L MYH11 NDE1 RPL15P20 RPL17P40
CNV_Williams[2010]_21 16p13.11-16p12.3 3006995 Gain ABCC1 ABCC6 C16orf45 FOPNL KIAA0430 MIR3179-2 MIR3180-2 MIR484 MPV17L MYH11 NDE1 NOMO3 PKD1P1 PKD1P2 RPL15P20 RPL17P40 RPL7P47 XYLT1
CNV_Williams[2010]_23 16p13.11 797807 Gain ABCC1 ABCC6 C16orf45 FOPNL KIAA0430 MIR484 MPV17L MYH11 NDE1 RPL15P20 RPL17P40
CNV_Williams[2010]_26 16p12.1 751397 Loss C16orf52 CDR2 EEF2K PDZD9 POLR3E RRN3P3 SDR42E2 TRNAL27 TRNAL7 UQCRC2 VWA3A
CNV_Williams[2010]_34 16p11.2 1813248 Loss De novo ALDOA ASPHD1 BCKDK BCL7C BOLA2 BOLA2B C16orf53 C16orf54 C16orf92 C16orf93 CA5P CD2BP2 CDIPT CORO1A CTF1 CTF2P DCTPP1 DOC2A FAM57B FBRS FBXL19 FBXL19-AS1 FUS GDPD3 HIRIP3 HSD3B7 INO80E ITGAL KCTD13 KIF22 MAPK3 MAZ MIR762 MVP MYLPF MYST1 ORAI3 PHKG2 PPP4C PRR14 PRRT2 PRSS36 PRSS53 PRSS8 PYCARD PYDC1 QPRT RNF40 RNU7-61P SEPHS2 SEPT1 SETD1A SEZ6L2 SLC7A5P1 SLX1A SLX1B SNORA30 SPN SRCAP STX1B STX4 SULT1A3 SULT1A4 TAOK2 TBC1D10B TBX6 TMEM219 TRIM72 VKORC1 YPEL3 ZG16 ZNF48 ZNF629 ZNF646 ZNF668 ZNF688 ZNF689 ZNF747 ZNF764 ZNF768 ZNF771 ZNF785
CNV_Williams[2010]_39 16p11.2 1813247 Gain ALDOA ASPHD1 BCKDK BCL7C BOLA2 BOLA2B C16orf53 C16orf54 C16orf92 C16orf93 CD2BP2 CDIPT CORO1A CTF1 DCTPP1 DOC2A FAM57B FBRS FBXL19 FUS GDPD3 HIRIP3 HSD3B7 INO80E ITGAL KCTD13 MAPK3 MAZ MVP MYLPF MYST1 ORAI3 PHKG2 PPP4C PRR14 PRRT2 PRSS36 PRSS53 PRSS8 PYCARD PYDC1 QPRT RNF40 SEPHS2 SETD1A SEZ6L2 SLX1A SLX1B SPN SRCAP STX1B STX4 SULT1A3 SULT1A4 TAOK2 TBC1D10B TBX6 TMEM219 TRIM72 VKORC1 YPEL3 ZNF48 ZNF629 ZNF646 ZNF668 ZNF688 ZNF689 ZNF747 ZNF764 ZNF768 ZNF771 ZNF785
CNV_Williams[2010]_42 16p13.11 809654 Gain ABCC1 ABCC6 C16orf45 FOPNL KIAA0430 MIR484 MPV17L MYH11 NDE1 RPL15P20 RPL17P40
CNV_Williams[2010]_53 16p13.11 809654 Gain De novo ABCC1 ABCC6 C16orf45 FOPNL KIAA0430 MIR484 MPV17L MYH11 NDE1 RPL15P20 RPL17P40
CNV_Elia[2012]_18 16q24.3 83789 Del ACSF3 CDH15 LOC283860 NCRNA00304
CNV_Jarick[2012]_31 16p13.11 1164092 del ABCC1 ABCC6 C16orf45 FOPNL KIAA0430 MIR484 MPV17L MYH11 NDE1 NTAN1 PDXDC1 PKD1P6 RPL15P20 RPL17P40 RRN3
CNV_Jarick[2012]_32 16p13.11 1162643 dup ABCC1 ABCC6 C16orf45 FOPNL KIAA0430 MIR484 MPV17L MYH11 NDE1 NTAN1 PDXDC1 PKD1P6 RPL15P20 RPL17P40 RRN3
CNV_Jarick[2012]_33 16p13.11 809654 del ABCC1 ABCC6 C16orf45 FOPNL KIAA0430 MIR484 MPV17L MYH11 NDE1 RPL15P20 RPL17P40
CNV_Jarick[2012]_34 16p12.3 770826 dup RPL7P47 XYLT1
CNV_Jarick[2012]_35 16p11.2 530466 del ALDOA ASPHD1 C16orf53 C16orf54 C16orf92 CA5P CDIPT DOC2A FAM57B GDPD3 HIRIP3 INO80E KCTD13 KIF22 MAPK3 MAZ MVP PPP4C PRRT2 QPRT SEZ6L2 SPN TAOK2 TBX6 TMEM219 YPEL3 ZG16
CNV_Jarick[2012]_36 16q23.3-16q24.1 589595 dup ADAD2 CDH13 DNAAF1 HSBP1 HSDL1 MBTPS1 MLYCD NECAB2 OSGIN1 SLC38A8 TAF1C
CNV_Jarick[2012]_37 16q24.1 751889 dup ATP2C2 COTL1 CRISPLD2 KIAA0513 KIAA1609 KLHL36 USP10 WFDC1 ZDHHC7

Gene (count: 352)

Literature-origin genes (count: 9)

Genes from other sources Help(count: 343)


Region (count: 9)
Region Name Location No. of Studies (postive/negative/trend)
16p13 chr16:0-16800000 3 (2/1/0)
16p12.3-12.2 chr16:16800000-24200000 1 (1/0/0)
16p13.11 chr16:14800000-16800000 1 (1/0/0)
16p13.3 chr16:0-7900000 1 (1/0/0)
16q12 chr16:47000000-56700000 1 (0/1/0)
16q21 chr16:57400000-66700000 1 (0/1/0)
16q23 chr16:74100000-84200000 1 (0/0/1)
16q23.1-24.3 chr16:74100000-90354753 1 (1/0/0)
16q24.1 chr16:84200000-87100000 1 (0/0/1)

View in gBrowse

Region: chr16:0..90354753    View in gBrowse
(The coordinate of the CNV has been transformed to NCBI Build 37 (hg19) in gBrowse)
View in gBrowse

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014