ADHDgene Database

SNP Report

Basic Info

Name	rs933555 dbSNP Ensembl
Location	Chr16:55704454(Fwd)
Variant Alleles	T/A
Ancestral Allele	T
Functional Annotation	intron_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000379906; ENST00000219833; ENST00000561820; ENST00000568529; ENST00000414754; ENST00000566163; ENST00000568655; ENST00000568943) upstream_gene_variant(ENST00000567238)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
SLC6A2	solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2	16q12.2	16(10/5/1)

SNPs in LD with rs933555 (count: 3) View in gBrowse (chr16:55702706..55706499 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs187714	downstream_gene_variant; intron_variant	1(0/1/0)	1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 0.977[CHD]; 0.956[GIH]; 1.0[JPT]; 1.0[LWK]; 0.957[MEX]; 0.98[MKK]; 0.912[TSI]; 1.0[YRI]
rs36024	downstream_gene_variant; intron_variant	3(0/3/0)	1.0[CHB]; 0.954[CHD]; 1.0[JPT]
rs41154	intron_variant; upstream_gene_variant	1(0/1/0)	0.849[ASW]; 1.0[CEU]; 0.955[CHB]; 0.976[CHD]; 1.0[GIH]; 0.951[JPT]; 1.0[LWK]; 1.0[MEX]; 0.981[MKK]; 1.0[TSI]; 1.0[YRI]