ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1023990 dbSNP Ensembl
Location Chr12:72382247(Fwd)
Variant Alleles A/G
Ancestral Allele G
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000333850)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Sheehan K, 2005 T/C allelic TDT P-value=1, X2=0.008, OR=1; TDT P-valu...... allelic TDT P-value=1, X2=0.008, OR=1; TDT P-value=0.3, X2=0.75, OR=1.4 of paternal origin; TDT P-value=0.4, X2=0.92, OR=0.8 of maternal origin More... did not attain significance at P<0.05 did not attain significance at P<0.05 Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs1023990 (count: 18) View in gBrowse (chr12:72342284..72407997 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 4)

LD-proxies (count: 14)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014