ADHDgene Database

SNP Report

Basic Info

Name	rs6565531 dbSNP Ensembl
Location	Chr17:79023380(Fwd)
Variant Alleles	G/A
Ancestral Allele	G
Functional Annotation	NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000575750; ENST00000572329) intron_variant(ENST00000321280; ENST00000575750; ENST00000575989; ENST00000428708; ENST00000575712; ENST00000576470; ENST00000570913; ENST00000572329; ENST00000435091; ENST00000321300; ENST00000575245; ENST00000392411; ENST00000571530; ENST00000573894) nc_transcript_variant(ENST00000576470; ENST00000570913; ENST00000573894) upstream_gene_variant(ENST00000572918; ENST00000573017)
No. of Studies	1 (significant: 0; non-significant: 1; trend: 0)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Ribases M, 2009(a)			Case-control test: P-value=0.61 for genotype analysis, P-val...... Case-control test: P-value=0.61 for genotype analysis, P-value=0.85 for allele analysis in Spanish adult ADHD group; P-value=0.90 for genotype analysis, P-value=0.65 for allele analysis in Spanish childhood ADHD group; P-value=0.18 for genotype analysis, P-value=0.06 for allele analysis in German adult ADHD group. More...	No association was found. No association was found.	Non-significant

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
BAIAP2	BAI1-associated protein 2	17q25	1(1/0/0)

SNPs in LD with rs6565531 (count: 2) View in gBrowse (chr17:79023380..79026872 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs8079626	NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant	1(1/0/0)	0.857[JPT]