ADHDgene Database

SNP Report

Basic Info

Name	rs5934770 dbSNP Ensembl
Location	ChrX:7169546(Fwd)
Variant Alleles	G/T
Ancestral Allele	G
Functional Annotation	intron_variant.
Consequence to Transcript	intron_variant(ENST00000217961)
No. of Studies	1 (significant: 1; non-significant: 0; trend: 0)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Brookes KJ, 2010			TDT P-value=0.02, OR=1.25 TDT P-value=0.02, OR=1.25	significant evidence for association, but cannot survive str...... significant evidence for association, but cannot survive stringent correction for multiple testing More...	Significant

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
STS	steroid sulfatase (microsomal), isozyme S	Xp22.32	3(2/1/0)

SNPs in LD with rs5934770 (count: 4) View in gBrowse (chrX:7014767..7270694 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.


rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]
rs5933863	3_prime_UTR_variant	1(0/1/0)	0.862[CEU]

rs_ID	Functional Annotation	r²[population]
rs5934917	intron_variant	1.0[CEU]
rs5934477	intron_variant; nc_transcript_variant	1.0[CEU]
rs5934915	intron_variant	1.0[CEU]