ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs393795 dbSNP Ensembl
Location Chr5:1428514(Fwd)
Variant Alleles G/T
Ancestral Allele G
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000270349; ENST00000513308; ENST00000453492)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Shang CY, 2011 A/C C allele FBAT P-value=0.804, Z=0.248 for total sample; A all...... C allele FBAT P-value=0.804, Z=0.248 for total sample; A allele FBAT P-value=0.796, Z=0.258 for combined subtype; C allele FBAT P-value=0.574, Z=0.563 for inattentive subtype More... no significant associations in the total sample no significant associations in the total sample Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs393795 (count: 10) View in gBrowse (chr5:1427803..1432825 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 1)

LD-proxies (count: 9)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014