ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1430961 dbSNP Ensembl
Location Chr4:90552920(Fwd)
Variant Alleles A/G
Ancestral Allele A
Functional Annotation intron_variant; nc_transcript_variant.
Consequence to Transcript intron_variant(ENST00000506864; ENST00000509723; ENST00000508021; ENST00000507916; ENST00000512077)
nc_transcript_variant(ENST00000509723; ENST00000506864; ENST00000508021; ENST00000507916; ENST00000512077)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Hinney, A., 2011 C GWAS P-value=1.49E-05, OR=1.76, Replication FBAT P-value=0.6...... GWAS P-value=1.49E-05, OR=1.76, Replication FBAT P-value=0.6698, Combination P-value=3.47E-05 More... This GWAS in a small group of clinically ascertained young G...... This GWAS in a small group of clinically ascertained young German patients with ADHD and population-based controls did not reveal genome-wide significant findings. Replication attempts in further German and international samples did also not lead to a P-value(s) below 5E-08. More... Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs1430961 (count: 8) View in gBrowse (chr4:90552920..90603419 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 8)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014