ADHDgene Database

SNP Report

Basic Info

Name	rs1266492 dbSNP Ensembl
Location	Chr15:91456102(Fwd)
Variant Alleles	T/C
Ancestral Allele	C
Functional Annotation	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; splice_region_variant; upstream_gene_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000560451; ENST00000558161; ENST00000561448) downstream_gene_variant(ENST00000560505; ENST00000561240; ENST00000558171; ENST00000560616; ENST00000560192) intron_variant(ENST00000431652; ENST00000557865; ENST00000559717; ENST00000560451; ENST00000430376; ENST00000559374; ENST00000558161; ENST00000360468; ENST00000561448; ENST00000561047) nc_transcript_variant(ENST00000559374; ENST00000561047) splice_region_variant(ENST00000360468; ENST00000431652; ENST00000557865; ENST00000559717; ENST00000560451; ENST00000430376; ENST00000558161; ENST00000559374; ENST00000561448; ENST00000561047) upstream_gene_variant(ENST00000560880; ENST00000558538; ENST00000557990; ENST00000560926; ENST00000559558; ENST00000559341; ENST00000558374; ENST00000560147)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
MAN2A2	mannosidase, alpha, class 2A, member 2	15q25	1(0/0/1)

SNPs in LD with rs1266492 (count: 1) View in gBrowse (chr15:91450441..91456102 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs2677744	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant	1(0/0/1)	0.861[MEX]; 0.811[MKK]