ADHDgene Database

SNP Report

Basic Info

Name	rs12631899 dbSNP Ensembl
Location	Chr3:144268855(Fwd)
Variant Alleles	T/C
Ancestral Allele	T
No. of Studies	1 (significant: 0; non-significant: 1; trend: 0)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Neale BM, 2010 (b)	T:C		GLM P-value=2.98E-05, meta-analysis P-value=0.03321 GLM P-value=2.98E-05, meta-analysis P-value=0.03321	One of the top 100 SNPs from imputed IMAGE II dataset One of the top 100 SNPs from imputed IMAGE II dataset	Non-significant

SNP related genes (count: 0)

SNPs in LD with rs12631899 (count: 46) View in gBrowse (chr3:144198658..144339980 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	#studies(significant/non-significant/trend)	r²[population]

rs12633370	1(0/0/1)	0.89[CEU]; 1.0[CHB]; 0.962[CHD]; 0.95[JPT]; 0.953[TSI]
rs16855659	1(0/1/0)	0.89[CEU]; 1.0[CHB]; 0.963[CHD]; 0.95[JPT]; 0.907[TSI]
rs10490827	1(0/0/1)	0.89[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[JPT]; 0.953[TSI]
rs12631326	1(0/1/0)	0.89[CEU]; 1.0[CHB]; 0.963[CHD]; 0.95[JPT]; 0.907[TSI]