ADHDgene Database

SNP Report

Basic Info

Name	rs1205411 dbSNP Ensembl
Location	Chr20:33857242(Fwd)
Variant Alleles	C/T
Ancestral Allele	C
Functional Annotation	downstream_gene_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000455178) intron_variant(ENST00000433764; ENST00000444717; ENST00000540582; ENST00000246186; ENST00000566203; ENST00000454184; ENST00000456350; ENST00000438751; ENST00000453892) nc_transcript_variant(ENST00000566203; ENST00000433764; ENST00000444717; ENST00000454184; ENST00000456350; ENST00000438751; ENST00000453892)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 3)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
MMP24	matrix metallopeptidase 24 (membrane-inserted)	20q11.2	1(0/0/1)

Approved Symbol	Approved Name	Location
EDEM2	ER degradation enhancer, mannosidase alpha-like 2	20q11.22
MMP24-AS1	MMP24 antisense RNA 1	20q11.22

SNPs in LD with rs1205411 (count: 1) View in gBrowse (chr20:33849179..33857242 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs1555322	intron_variant; nc_transcript_variant	1(0/0/1)	0.856[CEU]; 1.0[CHB]; 1.0[GIH]; 0.846[JPT]; 1.0[TSI]