ADHDgene Database

Gene Report

Basic Info

Approved Symbol	CATSPER2
Approved Name	cation channel, sperm associated 2
Location	15q15.3
Position	chr15:43920701-43960316, -
External Links	HGNC: 18810 Entrez Gene: 117155 Ensembl: ENSG00000166762 UCSC: uc001zsh.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by LD-proxy

Gene related studies (count: 0)

Gene related SNPs (count: 8)

rs_ID	Location	Functional Annotation
rs8042868	Chr15:43939642(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; missense_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant
rs2470121	Chr15:43937618(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant
rs2447211	Chr15:43936351(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant
rs2447208	Chr15:43933895(Fwd)	NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant
rs12443102	Chr15:43932103(Fwd)	NMD_transcript_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant
rs2447193	Chr15:43929733(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant
rs2920781	Chr15:43924682(Fwd)	NMD_transcript_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant
rs2927072	Chr15:43922398(Fwd)	3_prime_UTR_variant; downstream_gene_variant; intron_variant

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 11)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0005262	calcium channel activity	Molecular Function		40

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0030154	cell differentiation	Biological Process		51
GO:0009566	fertilization	Biological Process		3
GO:0036128	CatSper complex	Cellular Component		2
GO:0030317	sperm motility	Biological Process		6
GO:0007275	multicellular organismal development	Biological Process		71
GO:0007283	spermatogenesis	Biological Process		35
GO:0005515	protein binding	Molecular Function	IPI[16740636]	910
GO:0005929	cilium	Cellular Component		18
GO:0005244	voltage-gated ion channel activity	Molecular Function		6
GO:0001539	ciliary or flagellar motility	Biological Process		7

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with CATSPER2 (count: 1)

Gene Symbol	Pathway Count	Pathway List
CATSPER1	8	cell differentiation; CatSper complex; sperm motility; multicellular organismal development; spermatogenesis; protein binding; cilium; ciliary or flagellar motility;

Genes shared at least 2 KEGG pathways with CATSPER2 (count: 0)

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Region: chr15:43920701..43960316 View in gBrowse